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Creators/Authors contains: "Wang, Shiyu"

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  1. Free, publicly-accessible full text available May 9, 2024
  2. Attribute hierarchy, the underlying prerequisite relationship among attributes, plays an important role in applying cognitive diagnosis models (CDM) for designing efficient cognitive diagnostic assessments. However, there are limited statistical tools to directly estimate attribute hierarchy from response data. In this study, we proposed a Bayesian formulation for attribute hierarchy within CDM framework and developed an efficient Metropolis within Gibbs algorithm to estimate the underlying hierarchy along with the specified CDM parameters. Our proposed estimation method is flexible and can be adapted to a general class of CDMs. We demonstrated our proposed method via a simulation study, and the results from which show that the proposed method can fully recover or estimate at least a subgraph of the underlying structure across various conditions under a specified CDM model. The real data application indicates the potential of learning attribute structure from data using our algorithm and validating the existing attribute hierarchy specified by content experts.

     
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  3. The activities of neuronal signaling receptors depend heavily on the maturation state of the endosomal compartments in which they reside. However, it remains unclear how the distribution of these compartments within the uniquely complex morphology of neurons is regulated and how this distribution itself affects signaling. Here, we identified mechanisms by which Sorting Nexin 16 (SNX16) controls neuronal endosomal maturation and distribution. We found that higher-order assembly of SNX16 via its coiled-coil (CC) domain drives membrane tubulation in vitro and endosome association in cells. In Drosophila melanogaster motor neurons, activation of Rab5 and CC-dependent self-association of SNX16 lead to its endosomal enrichment, accumulation in Rab5- and Rab7-positive tubulated compartments in the cell body, and concomitant depletion of SNX16-positive endosomes from the synapse. This results in accumulation of synaptic growth–promoting bone morphogenetic protein receptors in the cell body and correlates with increased synaptic growth. Our results indicate that Rab regulation of SNX16 assembly controls the endosomal distribution and signaling activities of receptors in neurons.

     
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